Proposal summaries
B3427 - The effect of historic digit sucking on facial shape at 15 years of age - 16/12/2019
A previous study in 350 6-year-old children has suggested that digit sucking has no effect on craniofacial parameters but may affect occlusal development. It is reasonable to expect that if digit sucking has an effect on the dentition this also should also influence facial shape. We have a large sample and we should be able to determine whether the frequency of digit sucking and hand used have and long-lasting changes in face shape.
1. Campos MPMS, Valença PAM, Silva GMD, Lima MC, Jamelli SR, Góes
PSA. Influence of head and linear growth on the development of malocclusion at six years of age: a cohort study. Braz Oral Res. 2018 Oct 11;32:e98.
B3429 - Obesity and Inflammation - 16/12/2019
Between 2015 and 2016, obesity affected approximately 13.7 million children and adolescents in the United States. Children with obesity are more likely to have high blood pressure, abnormal lipids and insulin resistance even though overt cardiovascular disease may not develop for decades.Additionally, children with obesity are at increased risk for musculoskeletal and mental health disorders, as well as certain cancers. This project aims to to better understand the development and progression of the metabolic derangement seen with obesity in children as well as the associations with development of comorbidities. Inflammation is considered to be the common link between obesity and its progression to various comorbidities. If we are able to identify an early signal in children with obesity who are more likely to develop diseases such as asthma, cardiovascular disease and cancers we will be able to address the problem in a timely fashion and offer focused intervention and treatment to these high risk children
B3432 - Hypothesis-free and pQTL analysis of deep vein thrombosis aetiology a Mendelian randomization study - 16/12/2019
Deep vein thrombosis (DVT) usually presents as a blood clot which forms in the deep veins of the legs. It can be a life-threatening disease if not identified in time, leading to pulmonary embolism or heart failure. While research have found some risk factors using observational epidemiological studies, little is known about the exact causes of DVT.
B3428 - Epigenetic trajectories of mental health - 19/12/2019
Mental illness accounts globally for one third of years lived with disability, leading to tremendous loss of human, societal and economic potential. Most symptoms (e.g., depression, anxiety, conduct problems) emerge before adulthood, highlighting the first two decades of life as an important period of heightened vulnerability. Epigenetics has emerged as a biological system that captures the underlying genetic and environmental risk factors, but we do not yet understand the developmental dynamics in this system over time. Such knowledge, however, is critical if we are to understand how mental health disorders develop, and thus how they may be prevented.
B3430 - Liver measures in F30 clinic - 10/01/2020
Liver disease remains the only disease where mortality is rising in the UK. Alcohol-related liver disease (ARLD) and non-alcoholic fatty liver disease (NAFLD) are the two commonest indications for liver transplantation in this country.
ALSPAC analysed the prevalence of these diseases in the F@24 clinic using a modality called transient elastography, also known as Fibroscan. This gives measurement on how fatty the liver is (steatosis) and how scarred it is (fibrosis). This demonstrated over 1 in 5 participants had NAFLD, with 1 in 40 having evidence of fibrosis. Individuals with harmful drinking patterns AND obesity were at greatest risk of fibrosis. This is all the more alarming as ARLD and NAFLD tend to be diseases that manifest in the 4th and 5th decade.
ALSPAC has an opportunity to be, to the best of our knowledge, the only birth cohort to sequentially assess its participants for liver disease. We are proposing to re-assess the participants that remain in the G1 cohort for liver disease to see if there has been a progression in the number of cases seen. This would be one of the first attempt to map the development of liver disease in the general population setting.
B3425 - Does socioeconomic position modify associations between grandparental body composition and that of the grandchildren - 04/12/2019
The worldwide prevalence of obesity has tripled since 1975, and nearly a third of the world's population is now classified as overweight or obese. This rising prevalence of obesity is not only due to single genetic or environmental factors, but largely attributed to complex gene-environment interactions. Genetically predisposed individuals may be more prone to obesity in an obesogenic environment. Previous studies have focused on the identification of specific environmental factors that interact with genetic predisposition to obesity. The results indicate that physical activity, diet, age, gender and ethnicity could modulate the risk for obesity. Socioeconomic position (SEP) is relevant to all realms of behaviors and lifestyles, is a key factor that determines health across the lifespan, and may carry over to subsequent generations. The fact that BMI inequalities have persisted across different generations means that SEP is a significant factor to consider when understanding the role of environment. Parental SEP could influence the offspringâs risk of obesity through shared lifestyles such as dietary profile, home environment, social networks, and physical activity patterns early in life, which may be exacerbated by predisposition to obesity. Emerging studies have started to focus on SEP mobility across the life course, or intergenerational SEP mobility across two generations. The findings show evidence that higher parental education may be favorable in lowering obesity risk in offspring, especially for women. Longitudinal research should minimize reverse causation and allow us to investigate the dynamic interplay between oneâs social strata of origin and own achieved social strata on obesity. However, it is still unclear how early the ancestorsâ influence emerge and to what extent susceptibility to obesity is attenuated by SEP mobility.
We hypothesize that higher grandparental SEP, and upward SEP mobility across generations would diminish the grandchildrenâs risk of obesity, compared to those who are always in social disadvantaged strata. The approach to consider ancestorsâ SEP as a modifier in the heritability of BMI will add in tailoring appropriate interventions in future work.
B3426 - The longitudinal association between childhood sleep disturbances and psychotic experiences in adulthood - 03/12/2019
Sleep disturbances during childhood are common and often resolve spontaneously without intervention (Touchette et al., 2005; Galland et al., 2012). However, those that are persistent and frequent have been shown to be associated with the development of later psychopathology including psychotic like experiences (Jeppesen et al., 2014). Previous research exploring data from the Avon Longitudinal Study of Parents and Children has shown that children, aged 2.5 and 9 years old, experiencing frequent nightmares were more likely to report psychotic experiences at age 12 (Fisher et al., 2014). Similarly, nightmares at 12 years old was also found to be associated with an increased risk of psychotic experiences at aged 18 (Thompson et al., 2015). Such findings suggest that nightmares during childhood may represent an important and clinically significant indicator for risk of psychotic experiences in adolescence.
The relationship between childhood sleep disturbances and the presence of psychotic experiences beyond the age of 18 is still yet to be understood. Research has shown that the incidence of psychotic experiences often peaks during adolescence to early adulthood (McGrath et al., 2016) and sleep disturbances frequently co-occur with psychotic like experiences during this time (Taylor et al., 2015). Consequently, understanding which early sleep problems present as a risk factor for the development of later psychotic experiences is key. This project will explore the longitudinal associations between childhood and adolescent sleep problems between the ages of 2.5 - 17 years old and self-reported psychotic experiences at 24 years old.
Fisher, H.L., Lereya, S.T., Thompson, A., Lewis, G., Zammit, S. and Wolke, D., 2014. Childhood parasomnias and psychotic experiences at age 12 years in a United Kingdom birth cohort. Sleep, 37(3), pp.475-482.
Galland, B.C., Taylor, B.J., Elder, D.E. and Herbison, P., 2012. Normal sleep patterns in infants and children: a systematic review of observational studies. Sleep medicine reviews, 16(3), pp.213-222.
Jeppesen, P., Clemmensen, L., Munkholm, A., Rimvall, M.K., Rask, C.U., Jørgensen, T., Larsen, J.T., Petersen, L., van Os, J. and Skovgaard, A.M., 2015. Psychotic experiences coâoccur with sleep problems, negative affect and mental disorders in preadolescence. Journal of Child Psychology and Psychiatry, 56(5), pp.558-565.
McGrath, J.J., Saha, S., Al-Hamzawi, A.O., Alonso, J., Andrade, L., Borges, G., Bromet, E.J., Oakley Browne, M., Bruffaerts, R., Caldas de Almeida, J.M. and Fayyad, J., 2016. Age of onset and lifetime projected risk of psychotic experiences: cross-national data from the World Mental Health Survey. Schizophrenia bulletin, 42(4), pp.933-941.
Taylor, M.J., Gregory, A.M., Freeman, D. and Ronald, A., 2015. Do sleep disturbances and psychotic-like experiences in adolescence share genetic and environmental influences?. Journal of Abnormal Psychology, 124(3), p.674.
Thompson, A., Lereya, S.T., Lewis, G., Zammit, S., Fisher, H.L. and Wolke, D., 2015. Childhood sleep disturbance and risk of psychotic experiences at 18: UK birth cohort. The British Journal of Psychiatry, 207(1), pp.23-29.
Touchette, Ã., Petit, D., Paquet, J., Boivin, M., Japel, C., Tremblay, R.E. and Montplaisir, J.Y., 2005. Factors associated with fragmented sleep at night across early childhood. Archives of pediatrics & adolescent medicine, 159(3), pp.242-249.
B3424 - Is normal variation in brain activity during sleep related to liability for schizophrenia - 10/12/2019
Different parts of our brains communicate with one another as we learn new information during the day, then continue to communicate âofflineâ as we sleep. This overnight brain activity helps file memories for long-term storage, but the process is complex and delicate: lots of genes influence brain activity in ways we do not yet understand. We also need to establish why and how this process is disrupted in disorders like schizophrenia, which are associated with impaired sleep-dependent brain activity and memory. This study will investigate links between a set of schizophrenia-associated genes and brain function during sleep.
Participants will be asked to wear a âfitbitâ-like device for 2 weeks of normal activity, so we can track when and how much they sleep. We will then use a comfortable sleep cap that contains an array of recording devices to monitor EEG brainwaves while participants sleep at home for 2 nights. By analysing the EEG data using machine learning methods (similar to those used for speech recognition), we will identify patterns of activity that make up their personal âsleep fingerprintâ. This will allow us to test whether these fingerprints vary according to genetics in a healthy population, without interference from things like medication that complicate patient studies.
The main outcomes will be (1) development of novel analysis methods allowing us to capture brain activity, (2) a deeper understanding of the mechanisms that determine variation in patterns of brain activity during sleep and (3) a route towards understanding mechanisms of schizophrenia liability.
B3421 - Brain signatures of adolescent depression and depression risk - 29/11/2019
Population-based genetic and imaging studies of depression in adults have greatly advanced our understanding of this leading cause of global disability, particularly regarding associated neurobiological features. However, the causes and timings of such brain changes remain unknown, highlighting the need for a targeted study of the origins of these differences in younger individuals.
The largest risk factor for depression is a positive family history, and the major risk period for its development is during adolescence. The current project will therefore investigate whether the origin of these imaging features in adults (from work in UK Biobank, Enigma and Generation Scotland) is seen earlier in life in relation to increased risk for the disorder (including family history, polygenic risk, and associated traits such as depressive cognition, locus of control and self-esteem) using genetic and imaging data from children and parents in ALSPAC. Only now are there adult samples of sufficient size to inform such a focused study of adolescent depression, and this will form the first step towards determining potential causative associations between risk factors, associated neurobiology and depressive symptoms.
Summary data from these investigations in future could be combined in meta-analyses with other cohorts (e.g. MoBa) and consortia for discovery and replication. This would be under strict governance structures, where data would remain in Edinburgh and no individual data would be shared and this would be the focus of a separate application.
B3423 - Characterising the ALSPAC mothers who are also UKBiobank participants - 29/11/2019
Many of the ALSPAC mums and fathers/partners may have also volunteered to take part in the UK Biobank cohort study. It is important that the study Data Managers and the researchers understand who is in both studies. This is because studies such as ALSPAC and UKBiobank are often used together in order to study rare events or small associations (where you need large numbers of participants for the statistical tests to work) or they are used to check and confirm whether findings in one study are also seen in another study. Finding the same patterns means there can be more confidence the findings are genuine, rather than occurring by chance or due to error. In both cases, the statistical tests assume the people in one study are different to the people in the other study. However we now know there is substantial overlap between participants in ALSPAC and UK Biobank (and possibly other studies).
ALSPAC and UKBiobank are ensuring that any duplication is flagged so researchers can take account of this (without knowing the identities of the participants). To inform thinking on how to best deal with this issue, it is necessary to produce descriptive statistics describing the characteristics of the ALSPAC participants who are in UKBiobank and how these differ from ALSPAC participants who are not in UKBiobank.
B3418 - Neurobiological Mechanisms in Adolescent Marijuana Exposure and Schizophrenia Risk - 22/11/2019
Heavy marijuana (MJ) use in adolescence has been associated with 2-4 fold increased risk for schizophrenia (SZ) in later life. It is unclear if lighter and more sporadic MJ exposure (i.e. recreational MJ use), a pattern more typical of most adolescent users, has similar deleterious effects especially when more potent forms of MJ have become the norm during the past 2 decades. In a recently completed 3-year longitudinal study, we found that unaffected adolescent first-degree biological relatives of schizophrenia patients with recreational MJ use failed to show age-expected maturation in processing speed and executive functioning and in pruning of gray matter cortical thickness within dorsolateral prefrontal and parieto-temporal brain regions. The overall objective of this ALSPAC proposal are to understand the nature of the association between adolescent recreational MJ use and schizophrenia susceptibility. The specific aims are to delineate the impact of adolescent recreational MJ use on cognitive maturation, brain cortical development and its specificity on risks for developing schizophrenia and other common psychiatric disorders in later life.
B3417 - The effect of the perceived environmental surroundings on face shape at 15 years of age - 22/11/2019
This project will explore the perception of environmental conditions on the face shape of 15 year old children.
The question that will be addressed does environmental surroundings influence face shape?
B3420 - Cognitive ability measures in ALSPAC 30 clinic - 10/06/2020
We propose to collect data on cognitive ability at the ALSPAC @ 30 clinic.
B3415 - Investigating the role of genetics in the obese-asthma phenotype in children - 21/11/2019
We now know that children who have asthma and are also obese are more likely to require an urgent visit to the doctor for breathing problems than those who are not obese. Obese children are thought to have a different type of asthma, which is more severe and harder to control. This may be because the current treatments we use to manage daily symptoms do not work very well for this type of asthma. There are many theories that could explain why this is happening. One possible reason could be that the childâs genetic makeup may also play a role in the development of obesity as well as influence their response to treatment.
To address this problem, my proposed project aims to investigate how obesity can affect the response to treatment in children with asthma. In the first phase, I will examine whether obese children with asthma are less likely to respond to standard treatments than those who have normal weight using cutting-edge statistical methods. In the second phase, I will investigate whether certain genetic changes influence the childrenâs ability to respond to asthma treatments and if these same changes are also affected by excess weight.
To do this, I will analyze data that has already been collected from a large number of children with asthma in many different countries, including ALSPAC. The data that will be used for this project forms part of an international collaboration in pediatric asthma, called the Pharmacogenomics in Childhood Asthma (PiCA) Consortium. PiCA is the largest pediatric asthma consortium in the world and has all the necessary data to successfully carry out this research.
I expect the results of this project to help doctors and scientists understand why obese children with asthma are suffering with more severe symptoms than others. Identifying the reasons why they are severe will promote the development of new targeted treatments for children with asthma who have excess weight, with the ultimate goal of improving the management and quality of life for these children.
B3416 - Investigating a DNA methylation signature of e-cigarette use - 29/11/2019
Electronic cigarettes (e-cigarettes) have the potential to reduce the harm caused by smoking, but there is currently little information regarding their long-term safety. We propose a novel methodology to quantify aspects of the biological (specifically epigenetic) changes associated with e-cigarette use, and the extent to which these changes are associated with future disease risk. We will determine whether e-cigarette users (âvapersâ) are more comparable to smokers of tobacco cigarettes or to never-smokers with respect to their epigenetic signature. We will then determine whether the epigenetic profile associated with e-cigarette use differentially predicts risk of disease, and whether these epigenetic changes are causally linked to disease, and as such may be targets for preventative interventions. This research will provide key scientific insights, as well as valuable information to both cigarette smokers and vapers regarding the relative safety of these products in relation to their biological impact and future disease risk.
B3414 - The Association between the Natural Environment and Emotional Social and Behavioural Development - 02/12/2019
Exposure to natural environments has been shown to be associated with child development and outcomes later in life. This will be investigated by measuring exposure to the natural environment using a combination of linked spatial environmental indicators and self-reported data. For example, normalized difference vegetation index (NDVI) measurements will be used alongside subjective measurements of parks visits and outdoor time. This will assess exposure multi-dimensionally, by measuring how much an individual visits natural environments as well as the abundance of vegetation in their living environments.
The primary outcome of interest will be emotional, social and behavioural development, primarily assessed using the Strengths and Difficulties Questionnaire. It will be assessed at multiple time points and corroborated from parent and teacher-reported sources. Other mental wellbeing/developmental measures will be used as secondary outcomes. The project will also investigate potential intermediate variables such as air pollution, maternal wellbeing, biomarkers of stress and birth outcomes. Access to the natural environment is often distributed
by social class / socio-economic status. Therefore detailed and multiple dimensional indicators will be used to account for confounding.
B3411 - Using genetically informed designs to disentangle depression - 19/11/2019
Genome-wide association studies (GWAS) have been instrumental in highlighting associations between genetic variants and 1000s of traits. A recent GWAS of major depressive disorder (MDD) by the psychiatric genetics consortium (PGC) has recently identified 102 genetic variants associated with the disorder (Howard et al., 2019). In ALSPAC, genetic liability (indexed by polygenic risk scores) are associated with depression and numerous mood disorder phenotypes. However, genetics are only one side of the story and the interplay between genetic liability and environmental risk factors in the onset and maintenance of depression and related mood disorders is still unclear.
The data will be created by AK and will require a collaborator ID and DAA to have the data stored in Edinburgh on the secure server.
B3409 - The effect of early life exposures on body mass index from early childhood to early adulthood - 19/11/2019
Reducing childhood obesity is a major global public health challenge. However, interventions designed at changing individual or family behaviours often do not show an impact. It is important therefore to better understand the causes of childhood obesity. Whilst there is some evidence that factors in pregnancy are associated with obesity, it is unclear whether these are causes. It is also unclear whether different factors affect obesity at different ages.
For example, there is evidence that children whose mothers had gestational diabetes may have a greater risk of childhood obesity. Studies in Europe and South Asia have also reported that this effect may not emerge until later on in childhood. There is also evidence that infants born preterm are about two-fold more likely to be obese later in life than those born at term. However few studies have examined the association between preterm birth and BMI in later childhood.
In terms of socioeconomic factors, lower family socioeconomic position (SEP) has been associated with higher BMI from as early as 9 months. However, there is inconsistent evidence on the extent as to whether which the effect of SEP increases, decreases or remains constant over time. There is also evidence that neighbourhood exposures in the post-natal period (such as exposure to green spaces and area-level deprivation) are also associated with childhood BMI; however to our knowledge the effect of these exposures before birth has not been investigated.
The LifeCycle project is an EU initiative to harmonise key data from a number of EU studies, including ALSPAC. To maintain participant anonymity, we will be using innovative software called DataSHIELD to analyse the data. DataSHIELD allows the remote analysis of summaries of this harmonised data, but prevents the access of individual data.
The LifeCycle project provides a unique opportunity to examine how early life factors might relate to childhood BMI. In this âproof of principleâ study we will use DataSHIELD to carry out remote analyses of LifeCycle cohorts, selecting variables that have evidence for some effect on childhood BMI (maternal and paternal education, area level deprivation, access to greenspace, gestational diabetes and gestational age at birth). We will conduct analysis on BMI at different points throughout childhood to explore how the effect of these factors emerges over childhood.
B3413 - The role of the glycocalyx in cardiovascular and pregnancy health - 22/11/2019
The glycocalyx is a gel-like layer covering the inside surface of all blood vessels. It is essential for normal flow and activity of the blood. Laboratory studies suggest damage to the glycocalyx increases risk of heart disease and pregnancy complications such as preeclampsia, gestational hypertension, gestational diabetes, small and large for gestational age and preterm delivery. Glycocalyx could be a valuable target for disease prevention and treatment. We do not have studies in large numbers of humans that use methods which could help us understand the causal effects of the glycocalyx. The clycocalyx can be measured in two ways: (i) measures in stored blood samples of molecules that are inside the glycocalyx but are shed into the blood when it is damaged (e.g. heparin sulphate proteoglycans, hyaluronic acid and syndecan 1 (SND1) and (ii) microscopic measurement of of small blood vessues under the tongue. We want to add both of these types of measurements to ALSPAC to improve our understanding of how the glycogalix could influence health and well being in pregnancy, during childhood and in adulthood.
B3412 - Environmental exposures in pregnancy and early life influencing cognitive and cardio-respiratory development - 24/11/2019
Exposure to air pollution and road transport noise in pregnancy and early life may affect development of heart, lung and cognitive function that have long-term effects into adult life. However, it is unclear how important this is as there are few studies on the impact of very early life exposures to environmental pollution