Proposal summaries
B3236 - A Recall by Genotype Study to investigate the role of common TRPA1 variants in acute pain perception - 22/01/2019
Why do some people suffer with long term pain after an accident or surgery whilst another person recovers without incident? We believe that part of the answer lies in the subtle differences in people's genes. We are interested in how these little differences can add up to make an individual more or less likely to suffer from pain. Unfortunately we don't know at the moment which gene differences are important. We plan to invite people, from the ALSPAC cohort, with known common variants in a specific gene that has been linked to pain detection (TRPA1), to come for testing of their sensitivity to mildly painful stimulation. If we find people who have differences in their pain sensitivity, we will invite them back for more detailed tests. In these detailed tests, we will record the activity in their nerves during mildly painful stimulation to see if a change in their nerve activity underlies their differences in pain sensitivity.
The mildly painful stimulation that we use is well tolerated by both patients and volunteers. Most of our tests look at pain "threshold" e.g. the transition from warm to hot. We therefore use the lowest temperature that causes pain to be perceived. We will also ask participants to rate how much pain they feel in response to a given stimulus. We believe that these tests are less painful then giving blood or a skin biopsy. The participant can stop the experiment at any time if it is too uncomfortable.
B3234 - Nurture of Nature How Genes and Environments Interact in the Formation of Skills - 09/01/2019
The goal of our research proposal is to study the interplay between genetic influences and home and school environments in the context of child development. We aim to understand how maternal and child genes jointly determine parental investments, the role of parent-child interactions and daycare access in mediating genetic influences for skill formation, and epigenetic channels through which the childhood environment can influence childrenâs cognitive and behavioral development.
B3216 - Placental Weight or Volume as a Predictor of Poor Perinatal Outcomes - 03/01/2019
A healthy placenta is important for a healthy pregnancy and birth of a healthy baby. Some research shows that a larger placenta is associated with a healthier baby at birth. The placenta is normally weighed after the birth of the baby. This is too late to change things during the pregnancy that might help improve the mothers and babyâs health. The size of the placenta can be measured using ultrasound scans during pregnancy. If we can show that the size of the placenta is an accurate way of identifying women who might be at risk of having health problems during pregnancy and with their baby at birth, and that ultrasound measures of the placenta are accurate measures of its size, it might be possible to prevent problems for mother and her baby.
B3231 - Understanding the effects of prenatal infections and other environmental and genetic risk factors on child development - 09/01/2019
B3233 - Genetic and environmental factors influencing neurodevelopmental traits - 18/12/2018
The overarching goal of this project is to study risk factors contributing to common neurodevelopmental disorders (i.e. dyslexia and language impairment). We expect such factor to be both of biological (e.g. genetics) and environmental (e.g. socio-economic status) nature. Building on our previous work, we will take advantage of the rich cognitive and behavioural profiling available for the ALSPAC dataset. Atypical handedness has been consistently reported as a factor contributing to neurodevelopmental disorders. We will use a range of laterality indexes for hand preference to study the genetics of handedness and understand its relationship with disorders. The analysis will be conducted in the context of large international collaborations. The longitudinal dimension of the ALSPAC data will also allow us to study trajectories associated to neurodevelopmental disorders.
B3232 - Evaluating the impact of early life adiposity on later life disease risk - 18/12/2018
The prevalence of childhood obesity is a growing public health concern which is only expected to increase in the forthcoming years1. Previous studies have shown that children who become obese are at much higher risk of disease in later life, such as diabetes, hypertension and coronary heart disease2. Along with lifestyle factors such as physical activity and diet, there is mounting evidence that genetic factors also contribute substantially towards early life adiposity. Research to better understand this genetic component therefore holds considerable potential in terms of preventive strategies.
B3230 - Characterisation of childhood and adolescent favourable adiposity alleles identifed in adults - 18/12/2018
We would like to access the Children of the 90s and their parentsâ genetic data and some imaging and blood biomarker information in order to characterise âfavourable adiposityâ genes. By this we mean versions of genes (alleles) that result in a higher BMI and body fat but lower risk of diseases such as type 2 diabetes, hypertension and heart disease. Current studies have already identified 14 alleles associated with higher body fat % but lower risk of these diseases. We know that some of these âfavourable adiposityâ genes operate by putting more fat in the lower body, resulting in a lower waist to hip ratio (âpearâ rather than âappleâ shape) in women. Using MRI imaging from adults, we know that these alleles add more fat under the skin (subcutaneous) but less fat to the liver. These genes have been discovered in adults, and we would now like to test what they are doing in childhood and adolescents in the CO90s. To do this, weâd like to link the gene variants we are finding in adults to body fat imaging and circulating blood markers at all time points in childhood and adolescence where available. Weâd like to analyse the parentâs data to help in the discovery of these genetic variants by analysing with other large studies of adults.
B3229 - Omics prediction of adverse pregnancy outcomes - 13/12/2018
Despite their prevalence, little is known about the causes of adverse pregnancy outcomes. These include pregnancy loss (miscarriage or stillbirth), hypertensive disorders of pregnancy (HDP), gestational diabetes (GD), poor perinatal mental health, preterm birth (PTB), small for gestational age (SGA) and large for gestational age (LGA). Over 50% of pregnancies are affected by any of these outcomes, however we are unable to accurately predict their occurrence. Consequently, antenatal care currently stratifies women for different intensity of antenatal monitoring based on antenatal history, age and parity. Beyond early delivery (e.g. to prevent pregnancy loss or severe morbidity in mother or child), and stepwise treatment (from lifestyle through oral hypoglycaemic medication to insulin) for GD, there are few effective treatments to prevent these outcomes. Recent evidence showing that glycaemia-related differences in foetal over-growth predate the time in gestation of diagnostic tests highlights the need for better early prediction tools.
By identifying women at a high risk of pregnancy-related disease, we can maximise healthcare facilities, resources and screening strategies to allow for earlier diagnosis of these disorders. More sensitive and accurate predictive and stratification measures can assist with alleviating the burden on mothers and healthcare providers by redistributing maternal care resources. Incorporating genomics, epigenomics and metabolomics approaches will contribute towards a more cogent understanding of reproductive and perinatal health and disease11.
B3226 - Machine learning with causal inference - 12/12/2018
B3225 - Acetaminophen Exposure in Utero and Subsequent Impact on Female Reproductive Function - 12/12/2018
The number of eggs in a womanâs ovaries is determined by a) how many eggs she was born with, and b) how quickly they diminish during her lifespan. Because the total number of eggs she will ever have is established while forming in her motherâs womb, it is important to know if there are any factors in that prenatal environment that may affect the development of the eggs within the ovaries. Women with fewer eggs may suffer later in life from infertility or early menopause. Several studies have shown through experiments with animals that paracetamol taken by the mother while pregnant may have harmful effects on the reproductive function of the resulting female offspring. However, no studies have examined this in humans. In animal models, there are three proposed mechanisms for the effects seen in the female offspring: 1) disruption of the chemical signaling from the brain to the ovaries to induce puberty, resulting in earlier age of the onset of periods (which in human studies may be associated with earlier onset of menopause), 2) disruption of the natural menstrual cycle, resulting in shorter menstrual periods (which in human studies may be associated with earlier onset of menopause), and 3) formation of fewer follicles (eggs) in the ovaries, which can be approximated by measurement of anti-mullerian hormone (AMH) in the blood. Given that paracetamol is used worldwide as the analgesic of choice during pregnancy it is of critical importance that large-scale studies of humans be performed to investigate this association. This study will look at children of mothers who did and did not use paracetamol during their pregnancies and compare 1) the age of their first period, 2) how regular their periods are, and 3) their AMH levels.
B3227 - Observational Epidemiology of Social Media Use - 12/12/2018
B3228 - Health outcomes of smoking cessation using e-cigarettes - 17/12/2018
Cigarette smoking causes an estimated 120,000 deaths per year in the UK and costs the NHS about £2.6bn per year. Quitting smoking is therefore desirable but can be difficult even with professional support. A recent strategy for quitting is the use of e-cigarettes because they can be used to vary nicotine intake, their vapor does not contain known cancer-causing agents found in cigarette smoke, and their use closely mimics cigarette smoking behavior. However, these attractive features can lead to long-term use, and little is known about the resulting health outcomes because e-cigarettes have only recently become widely used. We plan to investigate these potential health outcomes by measuring the effects of e-cigarette use on DNA methylation in saliva and in blood. These effects will then be linked to health outcomes using Mendelian Randomization and publicly available genetic associations.
B3223 - Resemblance of parent-offspring dietary patterns and the development of offspring cardio-metabolic risks - 06/12/2018
Parents are believed to strongly influence the health behaviours of their offspring. It is also believed that parents are gatekeepers and function as important role model for the development of offspring health behaviours such as diet, physical activity, sedentary behaviour and sleeping. Diets has been considered as one of most important health behaviours that offspring adapt from parents throughout development stages of life including early childhood and adolescent period. In the life course epidemiology, diets has been considered as one of most important modifiable risk factors for the development of cardio-metabolic diseases. Most previous studies on the resemblance of parent-offspring dietary patterns were based on small sample and cross-sectional design. There is no study that considered (1) parent-offspring resemblance from early life to adulthood using repeated measures of parent-offspring diets; (2) whether this resemblance was influenced by other life style factors such as physical activity, sedentary behaviours, and sleeping (3) pathways of the resemblance of dietary trajectories predict the progression of offspring cardio-metabolic risks. Finally, (4) whether the genetic predisposition factors in parent-offspring dietary resemblance also contribute to the development of cardio-metabolic risk.
To our knowledge, this will be the first study to evaluate the parent-offspring dietary resemblance through a longitudinal cohort considering a range of other behavioural factors and genetic predisposition to the progression of cardio-metabolic risk factors throughout the life course. The Knowledge from this study will help to design effective family based early life intervention; identify appropriate target group, and period of intervention for healthy dietary habit as a prevention of later life chronic diseases.
B3219 - Applying causal inference methods to investigate the impact of adverse childhood experiences on psychopathology - 06/12/2018
Adverse childhood experiences (ACEs) are major risk factors for psychopathology. For example, children exposed to abuse, neglect, and dysfunctional home environments have an elevated risk of several later psychiatric conditions. However, as highlighted by a new report by the UK Science and Technology Select Committee (November 2018), it is unclear whether ACEs cause psychopathology, or whether the associations reflect confounding by genetic and environmental factors. For instance, children exposed to some ACEs (e.g., family psychopathology or substance abuse) might inherit genetic risk of psychopathology from their parents. ACEs also often co-occur with other environmental risks for psychopathology, such as prenatal exposures (e.g., smoking, alcoholism, stress) and postnatal exposures (e.g., poverty). This study will use genetically-informative methods and statistical innovation to disentangle the effects of ACEs from these confounds, and in turn strengthen understanding about the potential causal effects of ACEs in psychopathology.
B3224 - DNA Methylation in Spastic Type Cerebral Palsy - 13/12/2018
We are interested in differences in DNA methylation patterns among children with medical conditions acquired before or shortly after they were born. These conditions have no known genetic cause, and we think epigenetic phenomena -- like DNA methylation -- may account for some of their symptoms. We already have information about DNA methylation differences; we would like to evaluate our data using information from ALSPAC about how stable DNA methylation might be over time at different sites.
B3222 - Maternal Personality dysfunction and parent-child interaction - 11/12/2018
Maternal mental health is associated with variations in parenting and child wellbeing, however the mechanisms through which it affects child development are still poorly understood. Moreover, personality disorders and dysfunctional personality traits have received even less attention than other clinical disorders such as depression and anxiety, in the context of motherhood.
Thus, this project aims to fill this gap and investigate the effect of maternal dysfunctional personality traits on parenting behaviour and child outcomes.
In fact, personality disorders and dysfunctional personality traits are considered great risk factors for the well-being of the individual and for the potential negative effect on the child development. However, there is still no strong evidence about the extent and the causal pathways of how dysfunctional maternal features are affecting offspring wellbeing.
The aim of this project is to investigate the intergenerational effect of maternal mental health on the offspring using multi-generational ALSPAC data we will have the opportunity to explore the associations between different individual and social characteristics, such as geographical data, cognitive, socio-emotional, psychiatric data in mothers, partners and offspring.
Identifying components and potential causal pathways from maternal mental health to emotional infant problems is relevant to the creation of new policies of
B3221 - Lung function curve over the life-course using longitudinal data from multiple cohorts - 20/12/2018
Lung function curves have been explored mainly using cross-sectional data and for selected age ranges. There is no cohort that covers the full life-course for lung function yet, this is challenged by the time and effort needed to follow individuals from birth to death. The ALEC project gives us a unique opportunity to fit lung function curves longitudinally gathering all the lung function data available among all the cohorts which participated to the ALEC project, in a real world setting.
B3220 - Associations between physical activity and polycystic ovary syndrome features in adolescent girls - 05/12/2018
B3215 - The relationship between cord blood DNA methylation and childs IQ - 28/11/2018
Our team has been studying the relationship between DNA methylation and phynotype for several years.Recently we supposed that child's IQ may be largely effected by DNA methylation. So we want to do the analysis.