Proposal summaries
B4012 - Genome-wide investigation of heritable complex traits in infancy - 09/03/2022
Our recent review of published twin studies revealed that infant behaviour is significantly heritable, with twin heritability estimates ranging between 30 and 80% for psychologically-relevant traits. However, thus far there has been little attempt to study the genetic bases of infant behaviour looking at the DNA.
With this study, we aim to explore the role of common genetic variation on heritable infant behavioural traits. Genome-wide association analyses will be performed for infant psychologically-relevant characteristics collected in the first three years of life in the ALSPAC cohort. Results will then be combined with results from other cohorts in a meta-analysis on a large world-wide sample. Following this gene-discovery phase, we will use state of the art statistical genetic methodology to further investigate genetic influences on infants’ behaviour.
B4014 - Depression and smoking on the plausibility of the missing not at random assumption using fast causal algorithms - 01/03/2022
If we want to look at the impact of a given exposure on depression outcomes, we commonly require the assumption that the missingness in our depression indicator is "at random". "At random" is something of a misnomer here, and means "random conditional on measured covariates". In the instance that missingness is in fact not at random, i.e. depression itself affects participants likelihood to respond - then common analytical procedures to investigate the impact of exposures on depression may be biased.
We will develop a method to attempt to address this gap, using the effect of smoking on depression at 18 as a question to demonstrate our proposed approach, which will seek to provide testable conditions under which we can falsify the "missing not at random" assumption.
B4000 - General disease factor and developmental risk factors - 01/03/2022
More and more evidence suggests a link between mental and physical conditions such as ADHD and obesity (Cortese et al., 2016), eating disorder and inflammatory bowel disease (Larsen et al., 2018). Similar to the g-factor and p-factor (Caspi et al., 2015), Our team at University of Southampton has hypothesised one general disease factor (d-factor; Cortese et a., 2021) that summarises individual’s propensity to both mental and physical disorders, and accounts for the comorbidity between mental and physical conditions. We have been testing this hypothesis using two longitudinal datasets: the millennium cohort study and the 1970 British Cohort Study. We found that from adolescence to adulthood, association between mental and physical conditions strengthen gradually, and that there is indeed a general d-factor that explains individual propensity to develop comorbid mental and physical conditions. We would like to (1) test the hypothesis of d factor longitudinally from childhood to early adulthood, (2) examine the genetic and epi-genetic foundation of the general disease factor, and (3) investigate environmental risk factors related to higher d-factor scores.
B4011 - Prenatal air pollution fetal growth inflammation and childhood adiposity LongITools and LifeCycle - 28/03/2022
This proposal is part of LongITools (B3289) and LifeCycle projects.
There is inconsistent evidence of an association between prenatal exposure to air pollution and adiposity in childhood. Some studies suggest positive associations, possibly with stronger magnitude in boys, some find no association, and others find inverse associations between prenatal air pollution and adiposity in childhood. Most studies have been relatively small (<3,500 participants) and assess adiposity at a single time point.
The potential mechanisms linking air pollution to adiposity are still uncertain. Maternal exposure to air pollution may affect fetal growth, and intrauterine growth restriction will influence later-life adiposity. Inflammation is another hypothesised mechanism of the association between prenatal air pollution and offspring adiposity, and this might also be part of the fetal growth pathway.
Using data from three birth cohorts (ALSPAC, BiB and Generation R), this project will assess the association of different measures of air pollution (PM10, PM2.5, NO2 and NO) during pregnancy with fetal growth, trajectories of adiposity in childhood, and maternal and offspring inflammation. We will also explore possible sensitive windows by assessing trimester-specific associations, and whether associations differ by sex. If associations of air pollution with fetal growth, inflammation and childhood adiposity are evident, we will explore and quantify possible mediation by fetal growth and inflammation in the association between prenatal air pollution and childhood adiposity.
B4010 - Longitudinal associations of air pollution noise and built environment with glucose and insulin-related traits LongITools - 28/03/2022
This proposal is part of LongITools project (B3289).
Key modifiable risk factors for hyperglycaemia/diabetes include unhealthy diet, lack of physical activity and overweight/obesity. These are, in part, determined by the built environment, which comprises components such as walkability index, accessibility, population density, land use mix, and food environment. Most of the research assessing the association between built environment and glycaemic traits assesses type 2 diabetes mellitus (T2DM) in adulthood as an endpoint. Very few studies have assessed the association between the built environment and glucose and insulin-related traits in children/adolescents.
The association between air pollution and glucose and insulin-related traits has been more widely studied. Exposures to PM10 and PM2.5 have been associated with higher fasting blood glucose, and several meta-analyses have shown that air pollution is associated with the prevalence and incidence of T2DM. Air pollution, more specifically NO2 and PM10, has also been associated with insulin levels and insulin resistance, and some of these associations have been observed in childhood.
There is also evidence for associations between noise and higher prevalence and incidence of T2DM. To the best of our knowledge, no studies have assessed noise and glucose and insulin-related traits in childhood/adolescence.
This study aims to assess the associations of built environment, air pollution and noise with longitudinal changes in glucose, glycated haemoglobin, insulin and insulin resistance from childhood to early adulthood using data from European prospective studies.
B4009 - Early-life ambient environmental exposures and blood pressure trajectories LongITools - 28/03/2022
This proposal is part of LongITools project (B3289).
Blood pressure tracks from childhood to adulthood, and elevated blood pressure in childhood or adolescence is associated with several intermediate markers of cardiovascular disease (CVD) and with CVD events and mortality in adulthood. There is a growing body of evidence showing that ambient environmental exposures, such as air pollution, noise and many characteristics of the built environment are associated with high blood pressure/hypertension in adulthood, and some associations with blood pressure have also been observed in children.
Early-life, especially prenatal and early postnatal, is a period of rapid development and particularly vulnerable to environmental factors, and adverse exposures in this period could lead to long-term health effects, including higher risk of CVD. Some studies have shown associations between prenatal ambient environmental factors and blood pressure in children, including some measures of the built environment (e.g., facility density, facility richness and building density), noise, temperature, and air pollution. Investigating whether early-life ambient environmental factors are also associated with changes in blood pressure in different developmental periods will further contribute to the understanding of the importance of environmental exposures to the risk of hypertension across the life-course.
Using data from the Avon Longitudinal Study of Parents and Children (ALSPAC), we aim to assess the association of a range of ambient environmental exposures in early-life with changes in systolic (SBP) and diastolic blood pressure (DBP) during three developmental periods: childhood, adolescence, and early adulthood. We will also seek to replicate the associations found in ALSPAC in other independent European cohorts part of the LongITools project (Generation R, EDEN, PANIC and NFBC 1986).
B4008 - Association between air pollution and cardiovascular health in young adults LongITools - 28/03/2022
This proposal is part of LongITools project (B3289).
A growing body of evidence has shown that exposure to air pollution is associated with higher blood pressure/hypertension, cardiovascular events, and cardiovascular mortality. However, few studies have assessed the impact of air pollution on cardiovascular health in younger individuals.
A meta-analysis of cross-sectional and longitudinal studies has shown that an increase in PM2.5 was associated with higher carotid intima-media thickness (CIMT). Even though there is a growing body of evidence on the association between air pollution and cardiovascular outcomes later in life, very little is known in younger individuals [3]. A study carried out with young adults (mean age 28, SD 1.0) showed that nitrogen dioxide (NO2), but not PM2.5, was associated with increased pulse wave velocity (PWV).
It is also possible that the associations between air pollution and cardiovascular health outcomes differ according to intermediate factors, such as body mass index (BMI). A study with 158 individuals aged 17-22 years found that a 1 standard deviation (SD) change in long-term NO2 exposure was associated with 11.3mg/dL higher total cholesterol and 9.4mg/dL higher low-density lipoprotein cholesterol (LDL-C), and these associations were stronger amongst obese participants, suggesting that obesity might exacerbate the effects of air pollution.
The aim of this study is to assess the long-term associations of air pollution with several measures of cardiovascular health in young adults (i.e. central and peripheral blood pressure, heart rate, PWV and CIMT) and explore possible effect modifications by BMI in these associations.
B3966 - Stratification of ADHD developmental trajectories with evidence from environmental risk factors epi-genetics and neuroimaging - 28/02/2022
Individuals with attention deficit hyperactivity disorder (ADHD) may undergo different developmental trajectories throughout adolescence. Previous evidence has indicated that neural signatures and genetics could help to distinguish individuals with persistent ADHD symptoms from those remitted. However, little evidence has been provided to demonstrate whether environmental risk factors, such as substance use, could also affect the development of ADHD symptoms.
B3992 - Personalizing the assessment of pediatric short stature by utilizing common genetic variation in height and developmental timing - 21/02/2022
Growth during childhood can be disrupted by a number of diseases. Because of this, the longitudinal assessment of height is an essential aspect of preventive pediatrics. During these assessments, a child's height is measured and compared to the distribution of heights for that patient's age and sex based on population reference standards. Those children with height measurements that are two standard deviations below the mean are classified as having short stature. As short stature can be an indicator of growth failure due to underlying disease, many children are referred for further specialist care. However, the vast majority (75-99%) do not have disease after specialist evaluation and are instead deemed to have genetic/familial or idiopathic short stature [ISS]. These umbrella terms capture the known entities of familial short stature (FSS) and constitutional delay of growth and puberty (CDGP) as well as children whose short stature remains unexplained. The known entities of FSS and CGDP make up a substantial portion of the “benign” diagnosis of ISS. The traits underlying these conditions—height and pubertal timing—are highly heritable and thus, a significant portion of a patient’s genetic baseline can be quantified with the use of polygenic scores (PS), which measure the cumulative contribution of common genetic variants associated with a trait. We propose that using PSs to adjust the existing reference standards for a child's genetic predisposition to height and puberty pubertal onset will improve the value of growth screening.
B3995 - To investigate the aetiology of and trajectories to suicidal ideation and behaviour in adolescents and young adults - 21/02/2022
The aim of this project is to study self-harm and suicide attempts and ideation in adolescents and young adults (AYAs). We will use ALSPAC data to classify the cohort into different psychopathology groups (i.e. groups displaying similar psychiatric condtions like anxiety, depression etc.) and then to see which groups are at most risk of later self-harm or suicide. Furthermore, we will study how people transition between these different latent or hidden groups over time. Ultimately, we wish to examine the aetiology of, and then the trajectories to, self-harm and suicide in AYAs and get a clear picture as to the risk factors and life circumstances for those in the AYA group who later end up exhibiting this sort of behaviour. If this analysis is successful, we then hope to create a risk prediction model for self-harm and/or suicidal ideation and behaviour in AYAs so that implementation efforts can be put in place to prevent future self-harm and suicidal behaviour in AYAs.
B3996 - Comparison of cellular pattern in nasal lavage induced sputum and Peripheral blood in individuals with asthmamulticenter study - 21/02/2022
B4005 - Does birth weight modify the impact of different weight trajectories on cardio metabolic health in adulthood - 22/02/2022
The change in body weight from infancy to adulthood may impact later cardiometabolic health. In particular, early onset of excess weight gain and long duration of obesity in youth have been associated with an increased risk of cardiometabolic comorbidities in adulthood. High and low birth weight for gestational age, indicating abnormal fetal intrauterine growth, are also associated with an increased risk of cardiometabolic comorbidities in adulthood. There may be an interaction between birth weight and the change in body weight from infancy to adulthood, where the influence of weight gain on cardiometabolic health may depend on birth weight. In the present study, we aim to uncover the independent and combined effects of birth weight and the change in body weight from infancy to early adulthood, on cardiometabolic health in adulthood.
B3994 - Effect of Excessive Weight Gain during Pregnancy on Childrens Neurodevelopment - 22/02/2022
Epidemiological studies found that about 10% of children in the world suffer from neurodevelopmental disorders, such as Autism Spectrum Disorder (ASD), Intellectual Disability, Attention-Deficit Hyperactivity Disorder (ADHD) and others. Excessive weight gain during pregnancy appears to be an important factor affecting the health of pregnant women and their offspring. Weight gain during pregnancy changes with gestational age, and the total weight gain during pregnancy may not be able to accurately assess and identify the adverse maternal and infant outcomes. Therefore, it is of great significance to explore the weight changes at different time points during pregnancy. Further, the mechanism mediating the association between weight gain during pregnancy and childrens' neurodevelopmental disorders is still unclear. Epigenetic mechanisms may play an important role. This study will test the hypothesis that excessive weight gain during pregnancy may cause fetal epigenetic changes, affect the growth pattern of offspring, affect the brain development of children, and increase the risk for neurodevelopmental disorders in children.
B4006 - UK LLC Twitter use as a mental health phenotype during the COVID-19 pandemic - 28/02/2022
Information can be obtained from ALSPAC (B number folder) or the UK LLC on request
B4003 - CAMCOG collection of cognitive data - 28/02/2022
Cognitive data will be collected from both generations of ALSPAC using CamCog (Cambridge Cognition). This will be linked to the next ALSPAC COVID questionniare which is likely to go out just after Easter 2022.
B4002 - Pathway to psychosis among cannabis users - 28/02/2022
Mendelian randomisation studies have not yet clarified the direction of causality between heavy cannabis use and Schizophrenia. Thus, while cannabis use remains the most preventable risk factor for psychotic disorders, it is still unclear what makes some heavy users more susceptible to develop clinical psychosis. This is a question of global relevance with the spreading of laws legalising cannabis use for medicinal and/or recreational purposes.
Recently, epigenetic processes that regulate where our DNA is expressed, have been implicated in both psychotic disorder and substance use. Indeed, genome wide DNA methylation (DNAm) studies (EWAS), which measures where the DNA is switched on or off, have become a tool to look at the biological effects of environmental exposures.
This proposal, nested within a larger MRC Senior Fellowship project, focuses on the development of a genome wide DNAm score associated with regular cannabis use, taking into account both genetic factors and other environmental exposures. These analyses will run in parallel to mouse model experiment of exposure to both THC and CBD (cannabidiol), the most studied ingredient of cannabis. Finally, we plan to examine overlaps in the effect of cannabis compounds on the brain of mice with the effect in human blood tissue, to begin to understand a) the neurobiology of psychosis in the context of heavy cannabis use and b) to build epigenetic and genetic scores that might help distinguish those cannabis users that come to no harm from those who develop a) sub-clinical psychotic experiences paranoia and b) frank clinical psychosis.
B3917 - Gene-gene gene-enviroenment interaction and risk prediction of pediatric mental disorders multi-omics data analysis of ALSPAC - 17/02/2022
Growing evidence shows that the environment exposure and molecular level of maternal conditions might affect mental health of children; However, the relationships remained elusive. In this project, we aimed to study the interaction effects between genes and genes (G×G), genes and environments (G×E), as well as environments and environments (E×E). Furthermore, by combining both main effects and interaction effects of genes and environments, we want to construct a prediction model for children depression.
B3993 - Use of a polygenic risk score to stratify for treatment for extreme short stature - 17/02/2022
Children with idiopathic short stature (ISS) are defined by height below 2 standard deviations (SD) of the mean for age and sex without any endocrine, metabolic or other disease explaining the short stature. Recently the US Food and Drug Administration has approved Vosoritide for individuals with extreme short stature which is caused by a single gene mutation.
However, there are causes of extreme short stature that are not due a single gene mutation. These include polygenic predisposition to disease. We have recently generated a polygenic risk score that can reliably predict adult height, and this was tested in the ALSPAC cohort. We hypothesize that children who are extremely short due to a polygenic cause may also benefit from Vosoritide therapy.
Therefore, we posit that a polygenic risk score can help to identify children at extreme short stature. It could also help to predict if Vosoritide therapy could be helpful, by assessing if genetic changes in the biological pathway that is influenced by Vosoritide influences height. Last, we can use this polygenic risk score to better understand if extreme short stature is associated with other diseases and medically-relevant traits.
B3932 - Examining the latent structure of ALSPAC RSBB variables - 14/02/2022
There are a variety of ways to measure religious beliefs. However, there is evidence that some commonly used measures of religiosity function poorly for atheist and spiritual individuals. In the ALSPAC there are a several measures of religiosity based upon pre-existing scales, such as the Duke University Religion Index (DUREL) and the Brief Multidimensional Measure of Religiousness/Spirituality (BMMRS). The aim of the current study is to examine the latent structure of the items taken from these scales, for use in ALSPAC, and to explore whether these items are measurement invariant across religious, atheist and spiritual individuals. This will provide an insight into the way religiosity is measured in ALSPAC and inform future scale construction using these items.
B3983 - The effects of maternal antenatal fatigue and stress on maternal and offspring mental health - 17/02/2022
Maternal fatigue is common during pregnancy, but knowledge on predisposing factors is scarce, and research on the effects of maternal antenatal fatigue on maternal mental health and offspring mental health is lacking. We will study factors associated with maternal fatigue in a cross-sectional setting. Secondly, we will study if maternal fatigue associates with mental health in the offspring. In both settings ALSPAC will be used as replication sample for findings in the Northern Finland Birth Cohort 1986 (NFBC1986).