Proposal summaries

These are research proposals that have been approved by the ALSPAC exec. The titles include a B number which identifies the proposal and the date on which the proposals received ALSPAC exec approval.

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B3190 - Social Skills in a Changing Labor Market - 16/10/2018

B number: 
B3190
Principal applicant name: 
Ben Etheridge | University of Essex (United Kingdom)
Co-applicants: 
Professor Emilia Del Bono, Dr. Bernhard Schmidpeter
Title of project: 
Social Skills in a Changing Labor Market
Proposal summary: 

Across the developed world, employment has declined in middle-wage `routine’ jobs and increased strongly in jobs requiring a degree. Recent evidence from the U.S. and Sweden indicates this change is associated with an increase in the demand for jobs requiring social skills. Over the last 30 years the UK labour market has witnessed a well-documented increase in the supply of graduates while the occupational structure has shifted towards managerial jobs. However, there is no strong evidence as yet that these changes have benefitted workers with higher social abilities.
In this project we will investigate the labour market returns to social skills in the context of the UK. Thanks to the availability of long-running cohort studies, the UK offers an opportunity to examine unique data on individual’s characteristics, such as cognitive, socio-emotional, and physical abilities. ALSPAC is particularly suitable to our purposes as it also collects genetic information which can be used to carry out a Mendelian randomization research design to obtain causal estimates of the impact of social skills on wages or employment.
The changing labour market is at the centre of some of the most important social policy debates worldwide, especially those focused on the effect of artificial intelligence on the demand for different types of skills. We will contribute to these debates by providing novel evidence of the relationship between different types of skills and labour market outcomes.

Impact of research: 
Date proposal received: 
Thursday, 4 October, 2018
Date proposal approved: 
Tuesday, 9 October, 2018
Keywords: 
Social Science, Addiction - e.g. alcohol, illicit drugs, smoking, gambling, etc., Behaviour - e.g. antisocial behaviour, risk behaviour, etc., Developmental disorders - autism, Cognitive impairment, Congenital abnormalities, Learning difficulty, Mental health, Speech/language problem, GWAS, Statistical methods, Childhood - childcare, childhood adversity, Cognition - cognitive function, Communication (including non-verbal), Development, Genetics, Mendelian randomisation, Offspring, Psychology - personality, Social science

B3193 - Polygenic risk score analyses of adult psychopathology and childhood internalizing ADHD and social problems - 09/10/2018

B number: 
B3193
Principal applicant name: 
Hannah Sallis | University of Bristol (United Kingdom)
Co-applicants: 
Laura Schellhas, Elis Haan, Prof. Marcus Munafò
Title of project: 
Polygenic risk score analyses of adult psychopathology and childhood internalizing, ADHD and social problems
Proposal summary: 

Several longitudinal cohort-based studies have shown that the onset of various psychiatric disorders in adulthood are often preceded by psychiatric symptoms and disorders in childhood and adolescence (Kessler et al., 2007, Rao and Chen, 2009). Similarly, childhood psychopathology has been found to be associated with physical traits including BMI, as well as adversely affecting cognitive traits like IQ and educational attainment (Pine et al., 2001, Singh et al., 2013, Costello and Maughan, 2015). These individuals typically go on to have less favorable outcomes in areas of adult functioning related to health, SES and social relationships/isolation (Copeland et al., 2015, Costello and Maughan, 2015).
The goal of this project is to carry out large-scale analyses of the genetic overlap between adult psychiatric disorders and related traits, and childhood and adolescent psychiatric phenotypes. To achieve this, this study will use available GWAS summary statistics data on adult psychiatric disorders and related traits to construct polygenic risk scores (PRS), as well as phenotype data on childhood internalizing behaviour, ADHD/Attention Problems and Social Problems from multiple suitable cohorts. Specifically, we will test the ability of the PRS to predict childhood and adolescent psychopathology in a regression model that tests the association between each polygenic score and each trait at different ages, thus allowing us to test for differences in the associations between different PRS and childhood psychopathology across cohorts, outcomes and age.
Summary results will be transferred to the analytical team in Amsterdam who will meta-analyse the ALSPAC data along with several other cohorts from the CAPICE consortium.

Impact of research: 
Date proposal received: 
Tuesday, 9 October, 2018
Date proposal approved: 
Tuesday, 9 October, 2018
Keywords: 
Genetic epidemiology (including association studies and mendelian randomisation), Behaviour - e.g. antisocial behaviour, risk behaviour, etc., Mental health, Statistical methods, Genetic epidemiology

B3189 - heDevelopment of adiposity and physical activity during preadolescence through adulthood Pooled analysis of three birth cohorts - 03/10/2018

B number: 
B3189
Principal applicant name: 
Soyang Kwon | Lurie Children's Hospital of Chicago (USA)
Co-applicants: 
Title of project: 
heDevelopment of adiposity and physical activity during preadolescence through adulthood: Pooled analysis of three birth cohorts
Proposal summary: 
Impact of research: 
This research that examines physical activity and adiposity development in childhood through adolescence in a large sample that includes three internal birth cohorts will improve our understanding about the development of the two very important global health indicators: inactive lifestyle and obesity. this research will also help to identify intervention strategies for physical activity promotion and obesity prevention. Use of large cohort study data will allow us to examine subpopulations and conduct international comparisons.
Date proposal received: 
Monday, 1 October, 2018
Date proposal approved: 
Wednesday, 3 October, 2018
Keywords: 
Epidemiology, Obesity, Physical - activity, fitness, function

B3188 - GWAS of glycosuria - 03/10/2018

B number: 
B3188
Principal applicant name: 
Nicholas Timpson | MRC Integrative Epidemiology Unit, Avon Longitudinal Study of Parents and Children (United Kingdom)
Co-applicants: 
Mr Matthew Lee, Dr Kaitlin Wade, Dr Laura Corbin
Title of project: 
GWAS of glycosuria
Proposal summary: 

Glycosuria is a common disorder of pregnancy characterised by the presence of glucose in urine. Glycosuria may be caused by an increase in blood glucose such that the renal tubules are overwhelmed and complete reabsorption of presented glucose is not possible, a benign lowering of the renal threshold, or inhibition of renal tubule reabsorption 1,2. Primarily a result of a lower renal threshold, which is a consequence of increased renal blood flow, glycosuria during pregnancy may be a product of gestational diabetes and shows evidence as an indicator for later life adversity such as offspring risk of obesity 1,3.

Genes predisposing to type 2 diabetes have been associated with gestational diabetes 4 and there is growing evidence that impaired glucose regulation in pregnancy, including glycosuria, is associated with negative metabolic outcomes for offspring such as non-alcoholic fatty liver disease 5. Patients who develop gestational diabetes are at increased risk of gestational diabetes in future pregnancy, as well as being at risk of developing type 2 diabetes over the life-course 4. The presence of glycosuria may indicate future adverse outcomes in pregnancy and the life-course. To identify genetic variants associated with such a phenotype and to provide greater understanding of disease development, progression, and related complications we will set out to conduct a genome-wide association study (GWAS) of glycosuria during pregnancy, and investigate the genetic overlap between identified loci and multiple diabetic-related traits.

1. Lawlor, D. A. et al. Association of existing diabetes, gestational diabetes and glycosuria in pregnancy with macrosomia and offspring body mass index, waist and fat mass in later childhood: findings from a prospective pregnancy cohort. Diabetologia 53, 89-97, doi:10.1007/s00125-009-1560-z (2010).
2. Ferrannini, E. Learning From Glycosuria. Diabetes 60, 695-696, doi:10.2337/db10-1667 (2011).
3. Patel, S. et al. Associations of Gestational Diabetes, Existing Diabetes, and Glycosuria With Offspring Obesity and Cardiometabolic Outcomes. Diabetes Care 35, 63-71, doi:10.2337/dc11-1633 (2012).

Impact of research: 
greater understanding of glycosuria development and progression, as well as overlap with related pehnotypes
Date proposal received: 
Monday, 1 October, 2018
Date proposal approved: 
Wednesday, 3 October, 2018
Keywords: 
Genetic epidemiology (including association studies and mendelian randomisation), Diabetes, Pregnancy - e.g. reproductive health, postnatal depression, birth outcomes, etc., GWAS, Statistical methods, Genetic epidemiology, Genome wide association study, Mothers - maternal age, menopause, obstetrics

B3184 - Drivers and consequences of physical activity among children and young people Analyses of linked cohort and electronic records - 26/09/2018

B number: 
B3184
Principal applicant name: 
Lucy Griffiths | Swansea University Medical School (UK)
Co-applicants: 
Title of project: 
Drivers and consequences of physical activity among children and young people: Analyses of linked cohort and electronic records
Proposal summary: 

There is increasing – although still insufficient – evidence to link a multiplicity of benefits to regular physical activity in children and young people (CYP). Despite this, many CYP are insufficiently active. This research aims to improve our understanding of a) the complex interrelationships between individual, social and environmental factors that drive involvement in this behaviour, and b) associations between physical activity and health, and academic achievement. This five-year project will involve secondary analyses of data from four longitudinal well-characterised cohort studies in the UK, including ALSPAC. All of the studies have detailed information on physical activity and linked administrative (medical and education) records.

Impact of research: 
Our findings will inform the development of strategies to increase activity levels amongst children and young people, by identifying factors related to low achievement of physical activity recommendations. It will also improve our understanding of the relationship between physical activity and a range of health and educational outcomes.
Date proposal received: 
Monday, 24 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Epidemiology, Main behaviour of interest: physical activity, Statistical methods, Childhood - childcare, childhood adversity, Linkage, Methods - e.g. cross cohort analysis, data mining, mendelian randomisation, etc., Physical - activity, fitness, function

B3187 - Co-development of sensory activity and mental health symptoms - 25/09/2018

B number: 
B3187
Principal applicant name: 
Teresa Tavassoli | University of Reading (United Kingdom)
Co-applicants: 
Keren MacLennen
Title of project: 
Co-development of sensory activity and mental health symptoms
Proposal summary: 

We all perceive the sensory world around us differently. Some autistic children for example are overwhelmed by sounds or touch. This can make everyday situations such as visiting a busy supermarket a challenging task for families. Being overly sensitive has also been linked to anxiety. This project will explore if sensory reactivity, such as being oversensitive to sounds, can predict later anxiety and related mental health symptoms. To do so we would analyse already collected ALSPAC data on sensory reactivity and mental health symptoms from 6 months of age onwards. This includes already collected caregivers questionnaires about how their child reacts to the sensory world around them, such as sounds and lights, and questions about anxiety. That way we can test if the relationship between sensory reactivity and anxiety and related mental health issues is stable over time. Also we can test if early sensory reactivity can predict later mental health symptoms. Identifying whether sensory reactivity predicts mental health symptoms over time could lead to a clinical impact. If sensory reactivity symptoms such as being oversensitive to sounds are identified and treated earlier, it might be possible to reduce the impact of subsequent mental health problems, such as anxiety. Last, this project will allow us to investigate genetic underpinnings of sensory reactivity and identify potential biomarkers for sensory reactivity issues, such as hyper-and-hypo reactivity.

Impact of research: 
Anxiety and related mental health symptoms is at the core of this project. Anxiety ranks very high amongst the factors that influence mental health and quality of life, and is therefore one of the key dependent variables of this project. The proposed research will investigate the role of sensory reactivity in the co-evolution of mental health symptoms, focusing particularly on anxiety. If evidence in support of a causal role for sensory reactivity is found by the project, it can potentially lead to long-term clinical impact. Early identification of sensory reactivity symptoms such as hyperreactivity can in turn be used to make modifications to lifestyle and environment, thereby reducing the probability of development of anxiety. Moreover, if sensory reactivity symptoms such as hyperreactivity are identified and treated earlier, it might be possible to reduce the impact of subsequent mental health problems, such as anxiety. Elucidating the critical co-evolution of sensory reactivity, anxiety and related mental health symptoms , can lead to clinical impact by identifying sensitive time points for intervention and to the development of personalizing treatments according to sensory subtype and related mental health outcome.
Date proposal received: 
Tuesday, 25 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Mental health - Psychology, Psychiatry, Cognition, Developmental disorders - autism, Statistical methods, Development

B3185 - Assessment and harmonisation of cognitive measures in Britsih Cohort Studies - 25/09/2018

B number: 
B3185
Principal applicant name: 
Vanessa Moulton | Centre for Longitudinal Studies (CLS) UCL
Co-applicants: 
Emla Fitzsimons Prof, Gabriela Conti, George Ploubidis Prof, Marcus Richards Prof, Alice Sullivan Prof, Dr Eoin McElroy
Title of project: 
Assessment and harmonisation of cognitive measures in Britsih Cohort Studies
Proposal summary: 

A widely-used feature of the British birth cohorts is the wealth of cognitive measures collected throughout childhood, and in adult life. Nevertheless, the cognitive tests vary widely, both within and between cohorts. This project will test the cognitive measures in the cohort studies, including their relationship across a range of outcomes: subsequent cognitive scores; educational attainment; occupational attainment and income; mental health and wellbeing; physical health. We will assess the extent to which common scales, and/or scales assessing whether they measure the same construct. We will assess to what extent cognitive scales within the studies can reliably be used in cross-cohort analyses, and which scales are best suited to such comparisons. We will also assess whether socio-economic origins, cognitive scores, educational attainment, and socio-economic destinations has changed over time, and what implications this has for wider inequalities.

Impact of research: 
Guidance describing all the cognitive tests across all the cohort studies. This will include availability of the measures across studies and sweeps, what they intended to measure, reliability and validity measures, how to construct (including syntax) and interpret the measures, along with appropriate references and illustrations of previous work applying the variables. We will also provide a set of derived cognitive measures, with syntax and documentation, including harmonized measured for cross-cohort analysis. This will make the data more accessible to new groups of users, and facilitate cross-cohort analysis. As well as providing guidance for analysts on these measures, this exercise will be valuable for future cohorts, by identifying which cognitive measures are likely to add most value to future datasets, and which add little value. We will disseminate our findings and guidance via: academic journal articles; CLS webinars; and press releases and writing for a general audience, as appropriate. We anticipate that our substantive findings regarding cognition and socio-economic differentials will have wider impact.
Date proposal received: 
Monday, 24 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Mental health - Psychology, Psychiatry, Cognition, Mental health, Statistical methods, Cognition - cognitive function

B3183 - Genetic basis of handedness and relationship to complex disease - 25/09/2018

B number: 
B3183
Principal applicant name: 
Kyle Gaulton | University of California San Diego
Co-applicants: 
Title of project: 
Genetic basis of handedness and relationship to complex disease
Proposal summary: 

Genes help determine whether an individual is left- or right-handed, but the genes that contribute to handedness are mostly unknown. The goal of our study is to identify genetic factors that determine handedness by comparing genetic information from left- and right-handed individuals. We also plan to compare genetic data for handedness to data from other traits and diseases to determine whether handedness is correlated with later risk of disease.

Impact of research: 
Novel insight into why people are left- or right-handed and an understanding of how handedness relates to adult complex disease
Date proposal received: 
Saturday, 22 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Genetic epidemiology (including association studies and mendelian randomisation), Left- or right-handed , GWAS, Genetic epidemiology, Genetics, Genomics, Genome wide association study

B3182 - From Human GWAS to Muscle Biology - 25/09/2018

B number: 
B3182
Principal applicant name: 
David Karasik | Hebrew SeniorLife/Harvard MS (USA)
Co-applicants: 
Nicholas Timpson
Title of project: 
From Human GWAS to Muscle Biology
Proposal summary: 
Impact of research: 
We hypothesize that individual common and aggregated rare genomic variants associate with differences in muscle phenotypes: hand grip strength and appendicular mass. The current proposal is significant because the results of the proposed study could help identify at-risk individuals who should be targeted for sarcopenia prevention.
Date proposal received: 
Saturday, 22 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Genetic epidemiology (including association studies and mendelian randomisation), muscle health , DNA sequencing, Ageing, Genetic epidemiology, Whole genome sequencing

B3181 - Exposure to Gestational Diabetes and Blood Pressure Trajectories in Offspring - 25/09/2018

B number: 
B3181
Principal applicant name: 
Jonathan McGavock | University of Manitoba (Canada)
Co-applicants: 
Allison Dart, MD , Meghan Azad PhD
Title of project: 
Exposure to Gestational Diabetes and Blood Pressure Trajectories in Offspring
Proposal summary: 

The health of pregnant mothers can influence the health of her offspring across their entire lifespan. In high income countries, as many as 1 of every 10 mothers experiences diabetes during pregnancy. The impact of exposure to diabetes during pregnancy on the heart health of offspring is poorly understood. We recently found that individuals exposed to diabetes in the womb were 2-3 times more likely to develop high blood pressure and heart disease in their teens and early 20s, compared to individuals not exposed to diabetes in the womb. We want to determine if this is something we can detect in childhood or adolescence and possible reasons why maternal diabetes could predispose children and adolescents to high blood pressure and heart disease later in life.

Impact of research: 
Provide robust estimates and causal inference for the association between maternal glycemia during pregnancy and the risk for heart disease among offspring early in life.
Date proposal received: 
Friday, 21 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Epidemiology, Diabetes, Statistical methods, Blood pressure, Cohort studies - attrition, bias, participant engagement, ethics, Metabolic - metabolism, Offspring, Sex differences

B3180 - Colocalization analyses - 25/09/2018

B number: 
B3180
Principal applicant name: 
Mary Ward | University of Bristol
Co-applicants: 
Dr Denis Baird
Title of project: 
Colocalization analyses
Proposal summary: 

Colocalization analysis is used to explore whether two traits share the same causal variant at a particular genetic locus.

Impact of research: 
Date proposal received: 
Thursday, 20 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Genetic epidemiology (including association studies and mendelian randomisation)

B3179 - Sex hormones parental socialisation and gendered development of interests competencies and occupational aspirations - 25/09/2018

B number: 
B3179
Principal applicant name: 
Pia Schober | University of Tuebingen (Germany)
Co-applicants: 
Professor Birgit Derntl, Dr Helen Law
Title of project: 
Sex hormones, parental socialisation and gendered development of interests, competencies and occupational aspirations
Proposal summary: 

Despite increasingly gender egalitarian ideals, remarkable gender gaps persist in children’s early development and subsequent education, labour market and family choices. The question as to what extent biological factors, such as (prenatal) sex hormones, moderate or set a limit to social influences has received growing attention over the past decade. Yet our understanding of these relationships remains patchy and much remains to be explored. This project takes an interdisciplinary approach and integrates theoretical perspectives from sociology, social and clinical biopsychology and neuroscience. To-date, the number of empirical studies, which considered at least one measure of sex hormones and at least one set of socialisation factors or applied other innovative designs to shed light on the interaction of hormonal and socialisation influences, are limited (e.g., Berenbaum, Bryk and Beltz 2012; Davis and Risman 2015; Hines et al. 2002; Udry 2000). Drawing on the Avon Longitudinal Study of Parents and Children (ALSPAC), we will investigate how prenatal sex hormones and gendered parental environments and role modelling influence children’s interests in school subjects at different ages and the gender (a)typicality of their occupational aspirations and actual choices during adolescence and young adulthood. We extend the current literature by using prospective reports by parents and children over longer periods from early childhood to young adulthood. The findings will contribute to a better understanding as to what extent malleable environmental conditions may be more or less effective in altering gender differences in children’s identities, academic and occupational aspirations and choices.

Impact of research: 
What do you think the likely impact of your research will be? The results will provide important interdisciplinary evidence and extend our understanding of interdependencies of sex hormones and parental socialisation in shaping children’s gender development. We will present these finding at various international sociological and psychological conferences, which will contribute to spreading interdisciplinary theoretical and empirical approaches of gender development and socialisation. Over the next years, we aim to publish two to three journal articles in sociological, psychological or interdisciplinary journals.
Date proposal received: 
Tuesday, 18 September, 2018
Date proposal approved: 
Tuesday, 25 September, 2018
Keywords: 
Social Science, Statistical methods, Sex differences

B3167 - HDR UK ATLAS - 19/09/2018

B number: 
B3167
Principal applicant name: 
Nicholas Timpson | UoB (United Kingdom)
Co-applicants: 
Title of project: 
HDR UK ATLAS
Proposal summary: 

What is your Research Question
Can we enable research by producing and maintaining an up-to-date tool that summarises the tissue, longitudinal study data, archives and samples (‘resources’) in all viable UK collections and data harmonisation repositories? The combination of resources across multiple and complementary data/participant/sample sets can lead to substantial research contributions. The research resource landscape in the UK today ranges from the “macro” to the ”micro”, but where viable1, these different collections can be complementary in efforts to dissect important research questions. Learning from the experiences light touch, dynamic and responsive consortia, we seek to provide a shop window for resources which is comprehensive, automatically updated and facilitates impactful research.

Impact of research: 
Date proposal received: 
Tuesday, 18 September, 2018
Date proposal approved: 
Wednesday, 19 September, 2018
Keywords: 
Epidemiology, all, Data/samples/tissue/resource management, all

B3177 - Association between initial EPDS and long-term outcomes 19-02-2018 - 174222 - 24/10/2018

B number: 
B3177
Principal applicant name: 
Scott J Johnson | Medicus Economics LLC (USA)
Co-applicants: 
Elizabeth Chertavian, Si-Tien Mary Wang, Julia Bond
Title of project: 
Association between initial EPDS and long-term outcomes (19-02-2018 - 17:42:22)
Proposal summary: 

Postpartum depression (PPD) is a common occurrence among women who have just given birth. It has serious consequences for both the woman herself, and her family. PPD can have short term impacts, which can include feeling depressed, having difficulty performing normal tasks at home or work, and loss of interest in her new baby. It can also have long-term impacts, particularly for the children of women who are experiencing PPD. Research suggests that PPD and other mental health disorders affecting women who have just given birth can have serious economic implications, potentially costing up to £8.1 billion annually if the impacts on the children are considered (Bauer et al., 2014).
Recent research (Netsi et al, 2018) assessed long-term outcomes for mothers and offspring related to PPD using the ALSPAC data and found that severe PPD that persists past 8 months after birth is associated with an increased risk of negative outcomes for children on a large number of measures. We aim to build on their findings by evaluating whether early PPD (defined as PPD that occurs at the end of pregnancy and through 2 months following birth but which may resolve before the 8 month mark) similarly impacts long-term outcomes for women who have just given birth, their partners, and their children. We hope to track the impact of PPD on the likelihood of later depression for parents and children, as well as behavioral problems, antisocial behavior, psychosocial disorders, and academic achievement for children. We will use multivariate modeling techniques to account for factors that may confound the association.

Impact of research: 
Our analysis would estimate the relationship between early EPDS and study period EPDS, providing information pertinent to the potential impact of early interventions for PPD in women. Additionally, we can assess how early intervention could affect longer term outcomes in children. We would plan to publish the results in a high-impact journal to inform the research community. Further, the results of this analysis could be used in a cost-effectiveness model assessing a potential new treatment for PPD for the NHS. Sage Therapeutics is developing brexanolone, which is expected to be the first drug with an approved indication for PPD. Brexanolone has been granted Breakthrough Therapy designation by the Food and Drug Administration (FDA) in the US and PRIority MEdicines (PRIME) designation from the European Medicines Agency (EMA) for treatment of PPD. A cost-effectiveness model is being developed to assess the value of brexanolone versus the standard of care. A key component of that model is to link (a) the initial episode of maternal depression to (b) the long-term outcomes for mothers (e.g., continued depression) and their children (e.g., depression, mathematics scores) from PPD. The research questions that we plan to pursue directly involve this relationship.
Date proposal received: 
Wednesday, 12 September, 2018
Date proposal approved: 
Tuesday, 18 September, 2018
Keywords: 
Health Economics, Behaviour - e.g. antisocial behaviour, risk behaviour, etc., Learning difficulty, Mental health, Computer simulations/modelling/algorithms, Birth outcomes, Cohort studies - attrition, bias, participant engagement, ethics, Mothers - maternal age, menopause, obstetrics

B3178 - Association of dietary fat intake in infancy and early childhood with serum leptin concentrations and body fat in later life - 18/09/2018

B number: 
B3178
Principal applicant name: 
Caroline Taylor | University of Bristol (United Kingdom)
Co-applicants: 
Dr Pauline Emmett, Mrs Louise Jones
Title of project: 
Association of dietary fat intake in infancy and early childhood with serum leptin concentrations and body fat in later life
Proposal summary: 

Excess body fat is a critical public health problem with an increasing frequency worldwide. To develop strategies for prevention it is important to identify predisposing factors related to nutrition. A previous study has suggested that a high fat intake in infancy is related to a lower body fat and lower serum leptin concentrations at age 20 years, suggesting that early low fat intake could increase the susceptibility to development of overweight and leptin resistance at later ages. This is known as early fat programming. Studies in rats are in line with these finding in humans. The relationship between dietary factors and adiposity may be modified by child sex since there is a difference in some circulating hormones that is present from an early age. This hypothesis needs to be tested in a larger cohort where males and females can be assessed separately.

Impact of research: 
Inform the development of strategies to prevent obesity by identifying predisposing factors related to early life nutrition.
Date proposal received: 
Thursday, 13 September, 2018
Date proposal approved: 
Tuesday, 18 September, 2018
Keywords: 
Nutrition and body composition, Obesity, Statistical methods, Nutrition - breast feeding, diet

B3176 - Identifying blood-based DNA methylation biomarkers of cannabis use - 11/09/2018

B number: 
B3176
Principal applicant name: 
Christina Markunas | RTI International (RTP, NC, USA) (USA)
Co-applicants: 
Eric Johnson, PhD, Dana Hancock, PhD
Title of project: 
Identifying blood-based DNA methylation biomarkers of cannabis use
Proposal summary: 

Cannabis is the most commonly used illicit drug in the US, with 14% of Americans aged 12 or older reporting use during 2016 and 44% reporting lifetime use. Both acute (e.g., impaired motor function) and chronic health effects (e.g., dependence, cognitive function) of cannabis use have been reported. However, efforts to assess the scope of the adverse effects are hampered by under-reporting and the lack of available biomarkers which can reliably quantify cannabis usage patterns. Thus, there is a need to develop robust biomarkers of exposure to more accurately identify usage patterns in order to monitor those in treatment for adherence, fill-in missing cannabis use history, and/or predict health consequences. DNA methylation (DNAm) represents an excellent candidate for biomarker research, as it has the potential to differentiate acute vs. chronic exposure, timing of exposure, and cumulative exposure.

The overarching goal of the study is to identify the first reliable and useful blood-based DNAm biomarkers for cannabis use phenotypes. To achieve our goal, we propose to leverage the ALSPAC study, along with existing data from ~7 other cohorts to conduct the largest epigenome-wide (genome-wide DNAm) meta-analysis for any cannabis use phenotype to date (N~10,000 individuals across cohorts). From this, will identify and validate DNAm biomarkers of cannabis use representing general biomarkers (i.e., without regard to the etiology of the DNAm differences, possibly providing the greatest overall predictive ability), and those enriched for either exposure- or genetically-driven effects (i.e., DNAm as a mediator between genetic variants and cannabis use).

Impact of research: 
Results from these aims will set the stage for primary data generation to directly address more complex phenotypes like cannabis use disorder and to evaluate the utility of these biomarkers as refined phenotypes in genetic studies or as predictors of cannabis-related health effects (e.g., cognitive effects).
Date proposal received: 
Tuesday, 11 September, 2018
Date proposal approved: 
Tuesday, 11 September, 2018
Keywords: 
Genetic epidemiology (including association studies and mendelian randomisation), Addiction - e.g. alcohol, illicit drugs, smoking, gambling, etc., GWAS, Statistical methods, Epigenome-wide association study (EWAS) Mendelian Randomization cis-methylation quantitative trait loci (cis-meQTL mapping) mapping, Biomarkers - e.g. cotinine, fatty acids, haemoglobin, etc., Epigenetics, Genetic epidemiology, Genome wide association study, Mendelian randomisation, Statistical methods, Epigenome-wide association study (EWAS)

B3173 - PLAGEO Placental tissue gene expression and multi-omics - 06/09/2018

B number: 
B3173
Principal applicant name: 
Deborah A Lawlor | MRC IEU (United Kingdom)
Co-applicants: 
Dr Sue Ring, Dr Mel Lewcock, Dr Alix Groom, Dr Wendy McCardle, Dr Vikki Yip, Dr Gemma Sharp
Title of project: 
PLAGEO: Placental tissue gene expression and multi-‘omics
Proposal summary: 

The placenta is a temporary organ that is essential for a healthy pregnancy, normal growth and development of the fetus, and hence birth of a healthy infant. Placental dysfunction increases the risk of pregnancy loss (stillbirth or miscarriage), hypertensive disorders of pregnancy, gestational diabetes, preterm delivery, babies who are born too small or too large, death in the first year of life and cerebral palsy. We do not know how the placenta works. There are methods that can be used on placental tissue (collected after birth) to measure how the placenta works at a molecular level. However, it is not known how well these methods perform in large scale cohort studies like ALSPAC. The advantages of using these methods in cohorts like ALSPAC are that those studies have lots of information on the pregnancy and mother and child's health(which most studies that have used these methods do not). However, it is not easy in cohorts to collect placental tissue with the same rigour that has been used in placental research focused studies. In particular the time between delivery of the placenta and processing is suggested to ideally be 30 minutes, but this is not possible when placenta are being retrieved from hospitals and brought to a University laboratory like BBL. Whether longer time intervals make the measurements unreliable is not known. In this 'proof of concept' grant we will measure placental function at a molecular level by assessing gene expression, DNA methylation, and metabolites in detail using placenta from the ALSPAC-G2 cohort. We will assess how these measures relate to time interval between delivery and initial processing and undertake some preliminary research analyses.

Impact of research: 
The immediate impact will be related to knowing the reliability of the data we can obtain from placental tissue and being able to use the results from this PoC to support further large scale funding applications (including from collaborators)
Date proposal received: 
Thursday, 30 August, 2018
Date proposal approved: 
Tuesday, 4 September, 2018
Keywords: 
Epidemiology, Placenta Gene expression, metabolomics and DNA methylation, Statistical methods, Pregnancy Placenta

B3174 - Transmission of health within families via the gut microbiome - 06/09/2018

B number: 
B3174
Principal applicant name: 
Kaitlin Wade | MRC Integrative Epidemiology Unit (United Kingdom)
Co-applicants: 
Ana Zhu
Title of project: 
Transmission of health within families via the gut microbiome
Proposal summary: 

Obesity, happiness and smoking patterns are among some of the phenomenon that seem to be influenced by an individual’s social network, exhibiting a “three degrees of influence” property. Transmission of gut bacteria could be a potential mechanism for transmission of genetic traits from one individual to another. Hence, it could potentially provide a plausible mechanistic explanation for some of the social patterns transmitted within social networks. Understanding the extent of gut microbiome transmission can help us elucidate some of social patterns that we observe in the human population.

Impact of research: 
The gut microbiome is a novel and modifiable risk factor for health and disease that may have clinical importance and potentially facilitate therapeutic development to improve health and reduce the burden of disease.
Date proposal received: 
Friday, 31 August, 2018
Date proposal approved: 
Tuesday, 4 September, 2018
Keywords: 
Epidemiology, microbiology and bioinformatics, Behaviour - e.g. antisocial behaviour, risk behaviour, etc., Gut microbiome, health indicators, GWAS, Statistical methods, Metagenomics, Biological samples -e.g. blood, cell lines, saliva, etc., BMI, Microbiome

B3171 - A molecular test of the Nature of Nurture in the psychosis pathway - 30/08/2018

B number: 
B3171
Principal applicant name: 
Eva Velthorst | Icahn School of Medicine at Mount Sinai (United States)
Co-applicants: 
Eli Stahl, Abraham Reichenberg, Stanley Zammit
Title of project: 
A molecular test of the Nature of Nurture in the psychosis pathway
Proposal summary: 

The experience of maltreatment and neglect during childhood is among the strongest predictors for psychosis development later in life, but the underlying mechanisms remain subject of wide speculation. The overall goal of this project is to explore how parental genes that are not passed on to the child can help explain the association between adverse childhood experiences and psychosis through their contribution to the child’s environment.

A child’s exposure to a certain environment partially depends on the genes they inherit from their parents (for instance, genetic predisposition for risk-taking can affect the degree to which an individual seeks stressful life events). Importantly, we now know that genes of the parent that are not transmitted can nonetheless significantly shape the child through their impact on the parent’s behavior. This phenomenon, referred to as “genetic nurturing”, has typically been ignored in genetic studies, but may point to potential preventable exposures.

With increasingly powerful ‘genetic risk scores’ (i.e. the sum of risk genes that have shown to be associated with a disorder), we are now able to test the role of genetic nurturing in psychosis development.

Leveraging the Avon Longitudinal Study of Parents and Children (ALSPAC) study, we will be able to integrate genetic and developmental data on over 3,000 individuals that were followed up from birth up to age 24 - as well as their parents. This will give us the unique opportunity to examine the effect of genes that are not passed on to the child in the childhood adversity-psychosis relationship.

Impact of research: 
This study has the potential to reveal an important missing piece in our understanding of the childhood adversity-psychosis association.
Date proposal received: 
Wednesday, 29 August, 2018
Date proposal approved: 
Thursday, 30 August, 2018
Keywords: 
Genetics, Mental health, GWAS, Genetics

B3165 - The sins of the father does paternal smoking in the prenatal period influence offspring respiratory disorders - 29/08/2018

B number: 
B3165
Principal applicant name: 
Gemma Sharp | IEU (United Kingdom)
Co-applicants: 
Dr Rebecca Richmond
Title of project: 
The sins of the father: does paternal smoking in the prenatal period influence offspring respiratory disorders?
Proposal summary: 

The link between maternal smoking in pregnancy and asthma or wheeze in offspring is well-documented, but emerging evidence suggests that paternal smoking could also impact child health. This project aims to investigate to what extent paternal smoking in the prenatal period can causally affect childhood respiratory function, through a direct effect (e.g. via the male germline), or via an indirect intrauterine effect of maternal (passive) smoke exposure. Findings will help indicate whether or not fathers could be an effective (but currently understudied) target for interventions designed to lower the rate of childhood respiratory disorders.

Impact of research: 
Findings will help indicate whether or not fathers could be an effective (but currently understudied) target for interventions designed to lower the rate of childhood respiratory disorders.
Date proposal received: 
Wednesday, 29 August, 2018
Date proposal approved: 
Wednesday, 29 August, 2018
Keywords: 
Epidemiology, Addiction - e.g. alcohol, illicit drugs, smoking, gambling, etc., Pregnancy - e.g. reproductive health, postnatal depression, birth outcomes, etc., Respiratory - asthma, negative control, Development, Fathers, Mothers - maternal age, menopause, obstetrics, Offspring

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