Proposal summaries
B3548 - Investigating the influence of natural selection on metabolites - 28/05/2020
Environmental and genetic factors both play a role in shaping individual variation. Characteristics that increase an individualâs chance of survival and reproduction are more likely to be passed onto the next generation. This process is known as natural selection and it is reflected at the genetic level. Negative selection is a form of natural selection whereby rare genetic factors with harmful effect on survival and reproduction are removed from populations. Recent studies have found evidence of negative selection acting on complex traits such as body mass index (BMI), blood pressure and height.
This project will explore how natural selection influences molecular traits. Metabolites are intermediates or end products of biological processes and they are linked to numerous diseases. Gaining a better understanding of how metabolites are related to survival and reproduction will enable researchers to prioritise specific research avenues. This prioritisation may improve human health.
B3547 - A UK underpinning platform to study immunology and immunopathology of COVID-19 The UK Coronavirus Immunology Consortium - 03/06/2020
B3546 - UKRI Future Leaders Fellowship The heart-brain connection in ALSPAC30 cardioaggression and neuroselection - 02/06/2020
As more people live to old age, dementia is on the rise, but there is currently no effective treatment. This comes at enormous personal, societal and economic cost. I and others have previously shown that a decrease in heart function is associated with early cognitive impairment, however the underlying cause is not clear. It is possible that poor heart function may lead to poor blood flow in the brain, which may be the link. Another possible link between the heart and the brain runs in the opposite direction. Instead of heart problems leading to brain problems, it could be that lower cognitive function as a child leads to heart problems later in life. I will investigate the direction of the heart-brain association in 30yr olds from the ALSPAC cohort, that have had data collected since birth, including genetic, cognitive and heart measures. I will collect new detailed data on the heart and the brain during rest and during exercise. The results of this study are important as dementia is a public health priority. The clinical implications of reduced cognition among people with impaired heart function are considerable. By understanding the underlying mechanisms, we can reduce the burden of both of these conditions.
B3478 - Understanding how eating behaviours mediate genetic susceptibility to obesity - 26/05/2020
The obesity epidemic has largely been attributed to the modern food environment, in which foods high in fat and sugar are affordable, accessible and aggressively marketed. However, genetics and individual eating habits have also been argued to heavily influence weight. Eating more than needed can lead to weight gain, but for some, exercising control and knowing when to stop is particularly difficult. Longitudinal studies have suggested that flexible restraint (e.g. a gradual approach to dieting, using control when over-eating) is more adaptive and prevents weight gain in individuals with a lack of control over eating relative to more rigid forms of restraint (an âall or nothingâ approach). This study proposes to investigate how much of the relationship between inherited genes and obesity in adulthood, is facilitated by eating habits and food preferences, and whether these pathways can be lessened through contending eating behaviours and food preferences in childhood and adulthood.
B3545 - School starting age the role of gene-environment interactions - 03/06/2020
It is well known that September-born children perform better on school tests than August-borns, most likely because they are "older in the year". This project aims to explore the importance of gene-environment interplay within this context. More specifically, it will investigate whether this September-effect, or the effect of being "old in the academic year", varies with an individual's genetic predisposition, as proxied by a polygenic score for cognitive ability, for educational attainment, and for 'non-cognitive' skills. We will examine the effects on cognitive outcomes such as academic achievement, as well as on non-cognitive skills, such as the children's "strength and difficulties".
B3544 - Investigating the effect of maternal and paternal phenotypes on offspring cardiometabolic risk factors - 22/05/2020
Maternal and paternal characteristics (for example, maternal and paternal obesity, maternal gestational hypertensive disorders and maternal dietary intakes) are linked with the offspringâs risk of obesity and cardiometabolic disease in adulthood (such as coronary heart disease and type two diabetes). One explanation for such correlations is that maternal and paternal phenotypes alter the environment that the sperm, egg cells and fetus develop in, thereby causing the offspring to be more susceptible to cardiometabolic disease in adulthood. However, mothers and fathers also pass on their genes to their children, and provide an environment for their children to grow up in, both of which provide alternative explanations for the aforementioned correlations. Because of this it is currently unclear whether the motherâs and fatherâs BMI, maternal gestational hypertensive disorders and maternal dietary intakes have causal effects on the offspringâs risk of obesity and cardiometabolic disease.
B3543 - COVID-19- Pregnancy Cardiometabolic health and selection bias - 13/07/2020
We plan to use Children of the 90s to understand the following: (i) whether being smoking, overweight or obese, having higher blood pressure or blood glucose (sugar) or lipids (fat) makes you more likely to become infected with the SARS-CoV2 virus and to have more severe symptoms; (ii) whether having the infection makes these cardiovascular risk factors worise; (iii) whether pregnancy complications (hypertensive disorders of pregnancy, gestational diabetes, having a baby who is small or large at birth, delivering a baby early) that are know to relate to a woman's cardiometabolic health are related to risk of COVID-19 in the mother and their offspring; (iv)is there any evidence that the COVID-19 pandemic and its management is influence decisions about delaying plans to get pregnant / have children and what is the infection rate and severity in couples of reproductive age; (v) is there any evidence that pregnancy increases or decreases risk of COVID-19 risk and severity
B3541 - Tackling genetic and phenotypic heterogeneity of neurodevelopmental disorders - 19/05/2020
In the last 20 years, there was a tremendous progress in identifying genetic risk factors for autism or neurodevelopmental disorders (NDDs) such as intellectual disability and epilepsy. If mutations affecting synaptic or chromatin remodelling genes are now well accepted as susceptibility factors for autism and NDDs, many key questions remain unanswered: (i) What is the interplay between the common and the rare genetic variants ? (ii) What are the genetic and environmental factors that influence the clinical trajectories of the patients? (iii) What are the specific brain processes involved? To address some of these questions, we will investigate the genetic and phenotypic data of the ALSPAC cohort to understand how genetic mutations in autism/NDD associated genes can have different consequences on the cognitive development of the individuals depending on the genetic and environmental background. Beyond improving our knowledge on the genetic architecture of autism/NDDs, our project should also lead to the identification of protective factors explaining how some individuals are resilients to strongly deleterious mutations.
B3535 - Atopic dermatitis filaggrin null mutations and COVID-119 - 17/05/2020
Atopic Dermatitis (AD, also known as atopic eczema and eczema) is a common disease affecting 20% of children in the UK and other high-income countries. The major genetic risk factor for AD is loss of function mutations in filaggrin, a critical skin barrier protein. There are many theories around the high prevalence of filaggrin mutations in European and Asian populations and of eczema including some proposals that having a leaky skin barrier and an overactive skin immune system might lead to skin immune cells being activated through the skin resulting in protection against pandemics. The COVID-19 pandemic is associated with substantial COVID-related health problems and deaths.
We will use data from the Avon Longitudinal Study of Parents and Children (ALSPAC) prospective birth cohort study questionnaires and clinical visits to identify people with evidence of eczema in childhood, and genetic data to identify people with filaggrin null mutations. We are very familiar with these data in ALSPAC and have very recently analysed these data. We will then determine if people in early adulthood (the age of the cohort at the time of pandemic emergence) with evidence of childhood eczema are at reduced risk of reporting symptoms suggestive of COVID-19. The subsequent analysis will involve assessing if those with filaggrin null mutations (with and without eczema) have reduced risk of reporting COVID-19 symptoms. We will stratify by the presence or absence of asthma to see if the risks vary in these subgroups.
B3540 - Wellcome Longitudinal Population Study LPS COVID-19 Steering Group Secretariat - 17/05/2020
Seeking financial support to enable a secretariat for a newly formed steering group aimed at most effectively using UK population research resources to address questions relevant to the ongoing COVID-19 pandemic (£120585 over 12 months).
B3539 - Family background and the intergenerational transmission of educational attainment A multi-cohort analysis - 28/05/2020
The overall aim of this project is to study how family background influences childrenâs attainment. We are interested in two questions. The first question is, how do ânatureâ and ânurtureâ combine to influence childrenâs attainment? To answer this question, we will test whether parental education-associated genetics are associated with the quality of parenting they provide to their children. We will test associations with parental behaviour from before a child is born (e.g., smoking, alcohol use during pregnancy), through infancy (e.g. breastfeeding), childhood (e.g. warm, sensitive parenting; cognitive stimulation), and adolescence (e.g. parental monitoring). We hypothesise that parentsâ education-associated genetics are positively associated with these changing forms of parental investment across time. These analyses are a replication and extension of two previous papers from our lab (Wertz et al., 2018; Wertz et al., in press). In the proposed study, we will extend our previous work by a) analysing parenting across a wider age range of the child; b) replicating prior findings across several datasets (including ALSPAC); and c) incorporating measures of genetics and parenting from both mothers and fathers. The second question is, how do links between family socioeconomic status (SES) and childrenâs educational attainment change across time? To answer this question, we will test if the influence of family SES on childrenâs school performance has remained stable in Britain over time. We will test associations between family SES and childrenâs educational attainment across childhood, and compare estimates across different cohorts -- including ALSPAC -- from different historical periods. We hypothesise that the effect of family SES on childrenâs education will be relatively stable across time. Overall, this project will advance our understanding of the intergenerational transmission of educational attainment.
B3533 - Association between childhood trauma cognitive styles and depression - 12/05/2020
Existing research on depression vulnerability shows that early experiences such as exposure to childhood abuse could leave âcognitive scarsâ, which could increase vulnerability in later stages of life. Childhood emotional maltreatment is found to be strongly associated with vulnerability to psychopathology in comparison to physical and sexual maltreatment.(1) Adolescents having experienced childhood maltreatment were shown to depict reduced positive spontaneous thought, a feature of ruminative thinking constituting a risk factor for depression.(2) However, the role of mediating factors like cognitive styles in the association between childhood trauma and depression could be further explored. Various trauma types excepting physical neglect, predict depressive rumination, which predicts depression.(3) The differential association between age of exposure to trauma or specific trauma types and depression could be further researched as exposure to trauma in adolescence may have a greater effect size than that during early childhood with regard to developing increased odds of psychotic experiences. Examining the influence of mediating factors could be beneficial for preventing mental health issues such as distress and impairment at the population level by targeting negative cognitive styles.(4) Age groups requiring further support and intervention could be identified for addressing specific types of childhood trauma
B3534 - Depressogenic thinking in adolescence and depressive mood across early adulthood - 12/05/2020
Depression has become a common mental illness, and It is crucial to establish and study depressive symptoms through early adolescence across adolescence to early adulthood. It is vital to characterize specific causes and certain types of depression in populations to help identify critical points for intervention and treatment. Studies on Depressogenic thinking (i.e., negative cognitive styles) in early adolescence suggest there is an association with the development of depressive mood in this age group. However, the long-lasting effect of depressogenic thinking is not known, especially in early adulthood or later ages. This project will examine how different profiles of depressogenic thinking are associated with varying types of depression and depressive mood (e.g., irritability, anhedonia, depressive thoughts, fatigue or sleeping) and identify the mechanisms underlying negative thoughts (styles) and later depression. Although CBT and medication are used in treatment for diagnosed cases of depression, this study may potentially develop early intervention strategies that may target early adolescence to improve depressogenic thinking to prevent depression in early adulthood and beyond.
B3536 - Effect of adverse childhood experiences on adolescent depression anxiety and self harm An analysis in the ALSPAC cohort - 12/05/2020
Adverse childhood experiences (ACEs) have been consistently linked to psychiatric difficulties in adolescents. Individuals with at least 4 ACEs are at four times the risk of experiencing mental distress and disorder in their lives. ACEs have been estimated to contribute to approximately 30% of cases of anxiety and 40% of depression in adults in a North American sample and more than a quarter for both conditions in Europe. The combined annual costs of depression and anxiety attributed to ACEs were approximately $51 billion in Europe and $82 billion in North America. Adolescence is a tumultuous time, with significant life events and high rates of mental disorder occurring during this life stage. It is essential to assess the effect of exposure to ACEs on the severity of mental disorders at this stage in the life course.
B3537 - Relationship between early school experiences and adolescent self harm an analysis using the ALSPAC birth cohort - 12/05/2020
Improving the mental health of children and young people is a national priority in the UK. The rate of self-harm amongst adolescents ranges from 6.9 to 18.8 % in the UK. Schools can provide an environment that encourages positive mental health at an early age and prevents poor mental health in later years. Positive relationships with peers and positive perceptions of school connectedness (that is, adolescentsâ sense of belonging and attachment to school) are associated with increases in adolescentsâ psychosocial wellbeing and decreases in the number of mental health issues. School absenteeism is also associated with an increased risk of self-harm. Levels of school absenteeism may be reduced if early school experiences are of a positive nature. There is also an association of suicidal and non-suicidal self-harm with adverse experiences at school and even minor events like not enjoying school or class work and the feeling about teachers being unclear with respect to their behaviour. We will investigate if early school experiences are associated with adolescent self-harm in the ALSPAC cohort.
B3538 - Early metabolic features of adiposity-related cancer susceptibility - 12/05/2020
Cancers develop for many years before they are diagnosed. Using data from first-generation ALSPAC offspring, we aim in this study to estimate the effects of being more genetically susceptible to obesity-related cancers that commonly emerge in adulthood on metabolic traits measured in blood across early life; this should help to reveal what early stages of cancer development look like and when they occur. More specifically, we will examine associations of genetic risk scores for different cancers that are known to be influenced by obesity, e.g. colorectal cancer, with traits from targeted metabolomics measured in childhood (age 8y), adolescence (age 15y), and young adulthood (age 18y and 25y). This allows us to view subtle changes in metabolism over time which precede the onset of clinically detectable cancer by several decades. Recognizing the early signs of cancer development is vital for informing early detection, preventing its onset in older age, and improving survival.
B3529 - Exploring the text data provided by participants completing the COVID Q - 07/05/2020
In response to the COVID-19 pandemic, a questionnaire was put together and sent out to ALSPAC participants. A number of free text responses have been collected as part of that questionnaire and that data will be immensely valuable in understanding the circumstances of the participants during the pandemic. We plan to code this data in order to make the data usable in quantitative analyses and explore recurring themes in this additional data.
B3531 - Socioeconomic inequalities in mental health and cognitive trajectories - 07/05/2020
Whilst it is established that children of lower socioeconomic position (SEP) generally have worse mental health outcomes, most existing research is cross-sectional. Longitudinal studies are important for understanding when inequalities first emerge and the course they take (e.g. stable, widening or decreasing). Whilst longitudinal approaches are now commonly used to model inequalities in height and weight they have rarely been used for mental health outcomes. The aim of this project is use data from multiple EU studies to describe how inequalities in key mental health and cognitive outcomes emerge across childhood.
The aim of this project is to investigate the effect of socioeconomic position on trajectories of key mental health and cognitive outcomes across childhood. It will also serve as a âproof of conceptâ for using DataSHIELD to conduct multilevel analyses. Our specific aims are to (1) to identify the age at which inequalities emerge for different mental health outcomes, and (2) to describe whether inequalities decrease, remain stable, or widen over time.
B3528 - Transmission Distortion in the Human Genome - 07/05/2020
Transmission distortion refers to deviation from the normal 50:50 transmission of alleles from parents to offspring. Departures from this ratio can arise from a number of processes including âmeiotic driveâ where one allele is preferentially transmitted during meiosis, differences in the fertility or viability of gametes, differences in the survival of the embryo, and artefacts due to the selection of the study sample. The identification of loci which exhibit transmission distortion is not only of substantial biological interest, but is also desirable for the correct interpretation of genetic linkage and association studies.
NB. To be clear we already have the ALSPAC GWAS data required to perform the analyses listed as part of this project and so do not need to be sent any additional data. We are merely requesting permission to conduct analyses and for new staff to access the data.
B3530 - Health and wellbeing in surviving congenital heart disease patients - 14/05/2020
Patients with congenital heart (CHD) disease now live longer and therefore they are more likely to experience common aging condition.
One of these are cardiovascular disease (CVD) with relative morbidity and mortality.However, whether the established risk factors for CVD in the general population are the same with CHD is unclear.
In addition, there is a substantial evidence that risk for CVD begins in early life and that risk factors (e.g. obesity, high blood pressure, dyslipidaemia)measured in childhood and adolescence track and relate to adult risk, but the prevalence of these in children with CHD and their future risk on CVD is unknown and may differ from the general population.
Another issue for the aging CHD population is regarding their educational achievement. Academic performance represent a main area of interest as this is anticipated to have major impact in their quality of life. It's well recognised that some children with CHD can present neurocognitive impairment when compared to the general population. However, whether this has a significant effect in their overall academic performance remains unclear with discordant results reported.
To our knowledge there are no study that investigate the trajectories of cardiovascular risk factor and neurocognitive development (in term of educational achievement)from early childhood to adulthood life.